WHRN |
---|
![](//upload.wikimedia.org/wikipedia/commons/thumb/a/a7/Protein_DFNB31_PDB_1uez.png/250px-Protein_DFNB31_PDB_1uez.png) |
Available structures |
---|
PDB | Ortholog search: PDBe RCSB |
---|
List of PDB id codes |
---|
1UEZ, 1UF1, 1UFX |
|
|
Identifiers |
---|
Aliases | WHRN, CIP98, PDZD7B, USH2D, WI, DFNB31, whirlin, Whirin |
---|
External IDs | OMIM: 607928; MGI: 2682003; HomoloGene: 18739; GeneCards: WHRN; OMA:WHRN - orthologs |
---|
Gene location (Human) |
---|
![Chromosome 9 (human)](//upload.wikimedia.org/wikipedia/commons/thumb/d/de/Ideogram_human_chromosome_9.svg/300px-Ideogram_human_chromosome_9.svg.png) | Chr. | Chromosome 9 (human)[1] |
---|
| Band | 9q32 | Start | 114,402,080 bp[1] |
---|
End | 114,505,473 bp[1] |
---|
|
Gene location (Mouse) |
---|
![Chromosome 4 (mouse)](//upload.wikimedia.org/wikipedia/commons/thumb/9/9c/Ideogram_house_mouse_chromosome_4.svg/260px-Ideogram_house_mouse_chromosome_4.svg.png) | Chr. | Chromosome 4 (mouse)[2] |
---|
| Band | 4 B3|4 33.97 cM | Start | 63,333,147 bp[2] |
---|
End | 63,414,228 bp[2] |
---|
|
RNA expression pattern |
---|
Bgee | Human | Mouse (ortholog) |
---|
Top expressed in | - right adrenal cortex
- left adrenal gland
- left adrenal cortex
- left testis
- right testis
- pituitary gland
- right uterine tube
- anterior pituitary
- C1 segment
- body of uterus
|
| Top expressed in | - neural layer of retina
- lumbar subsegment of spinal cord
- interventricular septum
- visual cortex
- primary visual cortex
- tail of embryo
- thymus
- superior frontal gyrus
- cerebellar cortex
- Rostral migratory stream
|
| More reference expression data |
|
---|
BioGPS | ![](//upload.wikimedia.org/wikipedia/commons/thumb/8/8a/PBB_GE_DFNB31_47553_at_fs.png/250px-PBB_GE_DFNB31_47553_at_fs.png)
![](//upload.wikimedia.org/wikipedia/commons/thumb/7/73/PBB_GE_DFNB31_221887_s_at_fs.png/250px-PBB_GE_DFNB31_221887_s_at_fs.png) | More reference expression data |
|
---|
|
Gene ontology |
---|
Molecular function | - protein binding
- protein homodimerization activity
- protein heterodimerization activity
| Cellular component | - cytoplasm
- growth cone
- cell projection
- stereocilium
- photoreceptor inner segment
- stereocilia ankle link
- stereocilia ankle link complex
- actin filament
- cilium
- photoreceptor connecting cilium
- stereocilium bundle
- stereocilium tip
- ciliary basal body
- periciliary membrane compartment
- USH2 complex
- plasma membrane
- neuronal cell body
- cell junction
- synapse
| Biological process | - retina homeostasis
- sensory perception of light stimulus
- hearing
- inner ear receptor cell stereocilium organization
- positive regulation of gene expression
- cerebellar Purkinje cell layer formation
- establishment of protein localization
- auditory receptor cell stereocilium organization
- paranodal junction maintenance
- detection of mechanical stimulus involved in sensory perception of sound
| Sources:Amigo / QuickGO |
|
Orthologs |
---|
Species | Human | Mouse |
---|
Entrez | | |
---|
Ensembl | | |
---|
UniProt | | |
---|
RefSeq (mRNA) | |
---|
NM_001083885 NM_001173425 NM_015404 NM_001346890 |
| NM_001008791 NM_001008792 NM_001008793 NM_001008794 NM_001008795
|
---|
NM_001008796 NM_001008797 NM_001008798 NM_001276371 NM_028640 |
|
---|
RefSeq (protein) | |
---|
NP_001077354 NP_001166896 NP_001333819 NP_056219 |
| |
---|
NP_001008791 NP_001008792 NP_001008793 NP_001263300 NP_082916 |
|
---|
Location (UCSC) | Chr 9: 114.4 – 114.51 Mb | Chr 4: 63.33 – 63.41 Mb |
---|
PubMed search | [3] | [4] |
---|
|
Wikidata |
View/Edit Human | View/Edit Mouse |
|