Aestuariimicrobium
Genus of bacteria
Aestuariimicrobium | |
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Scientific classification ![]() | |
Domain: | Bacteria |
Phylum: | Actinomycetota |
Class: | Actinomycetia |
Order: | Propionibacteriales |
Family: | Propionibacteriaceae |
Genus: | Aestuariimicrobium Jung et al. 2007[1] |
Type species | |
Aestuariimicrobium kwangyangense Jung et al. 2007 | |
Species[2] | |
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Aestuariimicrobium is a singleton genus in the phylum Actinomycetota (Bacteria), whose first member, namely Aestuariimicrobium kwangyangense, was isolated from a diesel contaminated coastal site.[1] Like all Actinobacteria,[3] it is gram-positive and with a high CG content (69%). It is rod/coccoid shaped bacterium whose main quinone is menaquinone-7 (MK7).[1]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[4]
16S rRNA based LTP_08_2023[5][6][7] | 120 marker proteins based GTDB 08-RS214[8][9][10] | ||||||||||||||||||
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See also
References
- ^ a b c Jung, S.-Y.; Kim, H. -S.; Song, J. J.; Lee, S. -G.; Oh, T. -K.; Yoon, J. -H. (2007). "Aestuariimicrobium kwangyangense gen. nov., sp. nov., an LL-diaminopimelic acid-containing bacterium isolated from tidal flat sediment". International Journal of Systematic and Evolutionary Microbiology. 57 (9): 2114–2118. doi:10.1099/ijs.0.64917-0. PMID 17766882.
- ^ a b A.C. Parte; et al. "Aestuariimicrobium". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
- ^ Whitman, W.B.; Goodfellow, M.; Kämpfer, P.; Busse, H.-J.; Trujillo, M.E.; Ludwig, W.; Suzuki, K.-i.; Parte, A. (January 29, 2012) [1984(Williams & Wilkins)]. George M. Garrity (ed.). The Actinobacteria. Bergey's Manual of Systematic Bacteriology. Vol. 4 (2nd ed.). New York: Springer. p. 1750. ISBN 978-0-387-95043-3. British Library no. GBA561951.
- ^ Sayers; et al. "Aestuariimicrobium". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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Prokaryotes: Bacteria classification
- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies